Publications

total #n=147, h-index 41, i10-index 93 (Google Scholar Profile)

 

Book chapters

total #n=5
05  Fuller Z and WELLENREUTHER M (2024) Studying climate change effects in the era of omic sciences. Accepted in the book 'Effects of Climate Change on Insects: Physiological, Evolutionary, and Ecological Responses' by Oxford University Press More information 
04  Bybee SM, Futahashi R, Sharkey C, Simon S, Suvorov A, WELLENREUTHER M (2024) Transcriptomic insights into odonate ecology and evolution. In the book 'Dragonflies and Damselflies: Model Organisms for Ecological and Evolutionary Research (Second Edition)' by Oxford University Press, 21-36  
03  WELLENREUTHER M, Dudaniec, RY, Lancaster, LT (2023) Genomic insights into micro-and macro-evolutionary processes. In the book 'Dragonflies and Damselflies: Model Organisms for Ecological and Evolutionary Research (Second Edition)' by Oxford University Press, 7-20 More information 
02  WELLENREUTHER M, Stadmark J, Broström A (2016) The WINGS Network-Women IN Great Sciences: how a grassroots movement became a cross-faculty network. The XX Factor, 27  
01  Chapman BB, Hulthén K, WELLENREUTHER M, Hansson L-H, Nilsson J-Å, Brönmark C (2014) Patterns of animal migration in the book 'Animal Movement across scales' by Oxford University Press 4 More information 

 

Peer-reviewed articles

total #n=139

Pre-prints under review (0)

2026 (9)

139  Modern SJ, Ruza I, Flammensbeck CK, Radford CA, WELLENREUTHER M, Wylie MJ (2026) Captive reproduction of Australasian snapper (Sparidae: Chrysophrys auratus)− An emerging bream species for New Zealand aquaculture. Aquaculture Reports, 47, 103447  
138  Lam ZHT, Stewart J, Sandoval-Castillo J, Reis-Santos P, Van Eck RA, Gillanders BM, Ritchie P, WELLENREUTHER M, Huveneers C, Fairclough DV, Fowler AM, Hughes J, Green CP, Chick RC, Tracey SR, Krueck NC, Drew M, Möller LM, Beheregaray LB (2026) Continent-wide stock structure and connectivity of silver trevally (Pseudocaranx georgianus) based on population genomics and otolith shape and chemistry. Fisheries Research, 298, 107751  
137  Tian T, Pochon X, Bell P, WELLENREUTHER M (2026) Biofouling on aquaculture mesh: disentangling seasonal and environmental effects with DNA metabarcoding. Biofouling, 1-17  
136  Finn C, WELLENREUTHER M, Chagne D, Oosting T, Papa Y, Setiawan A, Besic V, Ritchie P (2026) The complete chromosome-level genome and mitogenome assembly of Seriola lalandi lalandi (Yellowtail Kingfish) for aquaculture and fisheries management. Authorea 2026 (0403)  
135  Wylie MJ, Ruza I, Rebstock R, Shaw N, Dennis LP, Lokman PM, Nocillado J, Elizur A, Kato K, WELLENREUTHER M (2026) Hormonal profiles and reproductive development of hatchery-reared first filial (F1) generation silver trevally (Pseudocaranx georgianus, Carangidae). Aquaculture Reports, 46, 103303  
134  Finn C, Barnes T, Chagne D, WELLENREUTHER M, Ritchie P (2026) Otolith shape variation reveals novel stock structure of range-shifting Yellowtail Kingfish (Seriola lalandi lalandi) in Aotearoa New Zealand. Authorea 2026 (0106)  
133  Stuart K, Oomen R, Tigano A, WELLENREUTHER M, Wold J, Field DL, Mérot C (2026) A Beginner’s Guide to Structural Variants in Eco-Evolutionary Population Genomics: Everything You Wanted to Know. Molecular Ecology, 35 (2), e70216  
132  Samuels G, Ribeiro F, Ashton D, Ford S, Fantham J, Blommaert J, Moran D, WELLENREUTHER M (2026) Selective breeding and production strategies to support snapper farming in the warming waters of New Zealand’s South Island. New Zealand Journal of Marine and Freshwater Research, 60 (1), e70011  
131  Brauer C, Bertram A, Sandoval-Castillo J, Fowler A, Bell J, Hamer P, WELLENREUTHER M, Beheregaray LB (2026) Environmental gradients decouple demographic and adaptive connectivity in a highly mobile coastal marine species. Molecular Ecology, 35 (5), e70273  

2025 (17)

130  Arce-Valdés LR, Swaegers J, Ballén-Guapacha A, Chávez-Ríos JS, Chauhan P, WELLENREUTHER M, Hansson B, Sánchez-Guillén RA (2025) Hybridization outcomes reflect context-dependent reproductive isolation in two damselfly hybrid zones. bioRxiv, 2025.12. 23.696213  
129  Tian T, Pochon X, Bell P, WELLENREUTHER M (2025) Biofouling on aquaculture mesh: disentangling seasonal and environmental effects with eDNA. bioRxiv, 2025.11. 20.689612  
128  Nicolas LA, Berdan EL, WELLENREUTHER M, Colinet H, Clouard A, De Wit P, Glémin S, Merot C (2025) Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation. Heredity, 1-12  
127  Beck SV, May SA, Kess T, Bradbury IR, Lozada‐Soto IA, WELLENREUTHER M (2025) Applying genomic offsets to breeding programmes: bridging evolutionary insights with practical applications. Evolutionary Applications, 18 (10), e70155  
126  Stuart K, Oomen R, Tigano A, WELLENREUTHER M, Wold J, Field DL, Mérot C (2025) A Beginner’s Guide to Structural Variants in Eco-Evolutionary Population Genomics: Everything You Wanted to Know. Authorea 2025 (0611)  
125  Oosting T, Star B, WELLENREUTHER M, Ritchie P (2025) Fine-scale population structure and local adaptation despite high population connectivity in a marine teleost (Chrysophrys auratus). Authorea, 2025, 0502. DOI: 10.22541/au.174618603.36471047/v1.  
124  Blommaert J, Bayer PE, Ashton D, Samuels G, Jesson L, WELLENREUTHER M (2025) Integrating genomics, machine learning, and computer vision to understand growth traits in selectively bred snapper (Chrysophrys auratus). bioRxiv, 2025.05. 29.656727  
123  Chen Z, Jesson L, WELLENREUTHER M, Zhang M, Mei Y, Blommaert J (2025). Machine Learning for Genomic Prediction of Growth Traits in Aquaculture: A Case Study of the Australasian Snapper (Chrysophrys auratus). BMC Bioinformatics xxx.
122  Blommaert J, WELLENREUTHER M (2025) Applying machine learning to unlock genomic insights in snapper breeding. Proc. Assoc. Advmt. Anim. Breed. Genet. 26, 126-129  
121  Wylie MJ, Ribeiro FF, Fantham W, Puklowski ME, Rebstock R, Shaw N, Mylonas CC, Kato K, Elizur A, WELLENREUTHER M (2025) Effects of hormonal treatments on spawning latency and egg production of captive silver trevally (Pseudocaranx georgianus). Aquaculture Reports, 43, 102964  
120  WELLENREUTHER M, Oomen RA, Han KY, Krohman R, Reusch TBH (2025) Beyond supergenes: the diverse roles of inversions in trait evolution. Trends in Ecology & Evolution, x (x), xxx  
119  Symonds JE, Scholtens MR, Dodds KG, Clarke SM, Costilla R, Walker SP, King N, Ragg NLC, Camara M, Ericson JA, Vignier J, WELLENREUTHER M, Waddington Z, Bailey J, Roberts RD, Malpot E, Tate ML, Slattery T (2025) Growing Aotearoa New Zealand’s aquaculture industry through breeding and genomics: progress, challenges and future opportunities. Proc. Assoc. Advmt. Anim. Breed. Genet. 26, 6-12  
118  Ware J, Abbott J, Abbott K, Beatty CD, Bota-Sierra CA, Büsse S, Cano-Cobos Y, Combey R, Ehlert J, Fomekong-Lontchi J, Frandsen P, Goodman A, Guralnick R, Juen L, Kalkman VJ, Kemabonta K, Kohli M, Lupiyaningdyah P, Newton L, Onsongo V, Pessacq P, Pinto AP, Ferreira RG, Salas R, Herrera MS, Sutherland L, Tennessen K, Tolman E, Dike RU, WELLENREUTHER M, Bybee S (2025) Odonata systematics: past, present, and future: a review of the phylogenetic works in Anisoptera (dragonflies). Insect Systematics and Diversity, 9 (4), 9  
117  Sutherland LN, Carter PR, Abbott J, Beatty C, Bota-Sierra CA, Büsse S, Cano-Cobos Y, Combey R, Cordero-Rivera A, Dike RU, Frandsen P, Goodman A, Guillermo-Ferreira R, Guralnick R, Hadfiled RK, Jijon G, Juen L, Kalkman VJ, Kohli M, Lin YF, Fomekong-Lontchi J, Lupiyaningdyah P, Newton L, Onsongo V, Pessacq P, Sánchez-Herrera M, Sánchez-Guillén RA, Tennessen K, Tolman E, Ware J, WELLENREUTHER M, Bybee S (2025) Zygoptera systematics: past, present, and future. Insect Systematics and Diversity, 9 (4), 5  
116  Bentley-Hewitt KL, Flammensbeck CK, Hedderley DI, WELLENREUTHER M (2025) Assessment of Stress and Immune Gene Expression in Australasian Snapper (Chrysophrys auratus) Exposed to Chronic Temperature Change. Genes, 16 (4), 385  
115  Wylie MJ, Kitson J, Russell K, Yoshizaki G, Yazawa R, Steeves TE, WELLENREUTHER M (2025) Fish germ cell cryobanking and transplanting for conservation. Molecular Ecology Resources, 25 (2), e13868  
114  Arce-Valdés LR, Ballén-Guapacha AV, Rivas-Torres A, Chávez-Ríos JR, WELLENREUTHER M, Hansson B, Sánchez-Guillén RA (2025) Testing the predictions of reinforcement: long-term empirical data from a damselfly mosaic hybrid zone. Journal of Evolutionary Biology, 38 (1), 10-27  

2024 (9)

113  Bentley-Hewitt KL, Flammensbeck CK, Crowhurst RN, Hedderley DI, WELLENREUTHER M (2024) Development of a Novel Stress and Immune Gene Panel for the Australasian Snapper (Chrysophrys auratus). Genes, 15 (11), 1390  
112  Blommaert J, Sandoval-Castillo J, Beheregaray LB, WELLENREUTHER M (2024) Peering into the gaps: Long-read sequencing illuminates structural variants and genomic evolution in the Australasian snapper. Genomics, 116 (5), 110929  
111  Bertram A, Bell J, Brauer C, Fairclough D, Hamer P, Sandoval‐Castillo J, WELLENREUTHER M, Beheregaray LB (2024) Estimation of effective number of breeders and effective population size in an abundant and heavily exploited marine teleost. Evolutionary Applications 17 (7), e13758  
110  Magnoni LJ, Collins SP, Wylie MJ, Black SE, WELLENREUTHER M (2024) Morphology and metabolic traits related to swimming performance in Australasian snapper (Chrysophrys auratus) selected for fast growth. Journal of Fish Biology. DOI: 10.1111/jfb.15807  
109  Leonard A, Abalos J, Adhola T, Aguirre W, Aizpurua O, Ali S, Andreone F, Aubret F, WELLENREUTHER M & others (2024) A global initiative for ecological and evolutionary hologenomics. Trends in Ecology & Evolution 39 (7), 616-620  
108  Narum SR, Campbell M, Coykendall K, Meek M, O'Malley KG, WELLENREUTHER M (2024) Advances in salmonid genetics—Insights from Coastwide and beyond. Evolutionary Applications 17(6), e13732  
107  WELLENREUTHER M (2024) Environmental change unlinks a gene from its trait. Molecular Ecology 33 (2), e17254  
106  Samuels G, Hegarty L, Fantham W, Ashton D, Blommaert J, Wylie MJ, Moran D, WELLENREUTHER M (2024). Generational breeding gains in a new species for aquaculture, the Australasian snapper (Chrysophrys auratus). Aquaculture 586, 740782  
105  Schiebelhut LM, Guillaume AS, Kuhn A, Schweizer RM, Armstrong EE, Beaumont MA, Byrne M, Cosart T, Hand BK, Howard L, Mussmann SM, Narum SR, Rasteiro R, Rivera-Colón AG, Sethuraman A, Taylor HR, Thomas GWC, WELLENREUTHER M, Luikart G (2024) Genomics and Conservation: Guidance from training to analyses and applications. Molecular Ecology Resources 24 (2), e13893  

2023 (11)

104  Sánchez-Guillén RA, Arce-Valdés LR, Swaegers J, Chauhan P, Cávez-Rios J, Rivas-Torres A, WELLENREUTHER M, Hansson B (2023) Variable genomic patterns of hybridization in an expanding hybrid zone of damselflies. Authorea DOI: 10.22541/au.164628976.68855627/v1 Publication date 2023-04-27. 
103  Oosting T, Star B, WELLENREUTHER M, Ritchie P (2023) Whole genome sequencing reveals distinct population structure in a high gene flow marine species, Australasian snapper (Chrysophrys auratus). Authorea, 2023, 1003. DOI: 10.22541/au.169634755.50451607/v1.  
102  Venney CJ, Anastasiadi D, WELLENREUTHER M, Bernatchez L (2023) The evolutionary complexities of DNA methylation in animals: from plasticity to genetic evolution. Genome Biology and Evolution 15 (12), evad216 
101  WELLENREUTHER M, Ferchaud AL, Beheregaray LB, Bierne N, Soares Correa A, Elmer K, Fraser D, Gifford D, Gompert Z, Johnson M, Kassen R, Martin R, Meek M, Mergeay J, Mérot C, Naish K, Narum SR, Sunnucks P, Thomas F, Thrall P, Yáñez JM, Zhan J, Zhan X (2023) For the love of fish, nature and people: A tribute to Professor Louis Bernatchez (1960-2023). Evolutionary Applications 16 (10), 1663-1670  
100  Berdan EL, Roger F, WELLENREUTHER M, Kinnby A, Cervin G, Pereyra R, Töpel M, Johannesson K, Butlin RK, André C (2023) A metabarcoding analysis of the wrackbed microbiome indicates a phylogeographic break along the North Sea–Baltic Sea transition zone. Environmental Microbiology, 25(9):1659-1673  
99  Anastasiadi D, WELLENREUTHER M (2023) A conserved genomic code underpins animal DNA methylation patterns. Trends in Ecology & Evolution, 38:11, 1016-1018  
98  Bertram A, Bell J, Brauer CJ, Fowler A, Hamer P, Sandoval-Castillo J, Stewart J, WELLENREUTHER M, Beheregaray LB (2023) Biogeographic provinces and genomically delineated stocks are congruent in snapper (Chrysophrys auratus) from southeastern Australia. ICES Journal of Marine Science, fsad068  
97  Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, WELLENREUTHER M, Chagné D (2023) A multiplexed plant–animal SNP array for selective breeding and species conservation applications. G3: Genes|Genomes|Genetics 13 (10), jkad170  
96  Papa Y, WELLENREUTHER M, Morrison MA, Ritchie PA (2023) Genome assembly and isoform analysis of a highly heterozygous New Zealand fisheries species, the tarakihi (Nemadactylus macropterus). G3: Genes|Genomes|Genetics 13 (2), jkac315  
95  Moran D, Schleyken J, Flammensbeck C, Fantham W, Ashton D, WELLENREUTHER M (2023) Enhanced survival and growth in the selectively bred Chrysophrys auratus (Australasian snapper, tāmure). Aquaculture 563 (1), 738970  
94  Oosting T, Martínez-García L, Ferrari G, Verry A, Scarsbrook L, Rawlence N, WELLENREUTHER M, Star B, Ritchie P (2023) Mitochondrial genomes reveal mid-Pleistocene population divergence, and post-glacial expansion, in Australasian snapper (Chrysophrys auratus). Heredity 130 (1), 30-39  

2022 (14)

93  Papa Y, WELLENREUTHER M, Morrison MA, Ritchie PA (2022) Comparative genomics of tarakihi (Nemadactylus macropterus) and five New Zealand fish species: assembly contiguity affects the identification of genic features but not transposable elements. bioRxiv, 2022.08. 01.502366  
92  Lancaster LT, Fuller ZL, Berger D, Barbour MA, Jentoft S, WELLENREUTHER M (2022) Understanding climate change response in the age of genomics. Journal of Animal Ecology 91 (6), 1056-1063  
91  WELLENREUTHER M, Dudaniec RY, Neu A, Lessard J-P, Bridle J, Carbonell JA, Diamond SE, Marshall KE, Parmesan C, Singer MC, Swaegers J, Thomas CD, Lancaster L (2022) The importance of eco-evolutionary dynamics for predicting and managing insect range shifts. Current Opinion in Insect Science 52, 100939  
90  Ruigrok M, Xue B, Catanach A, Zhang M, Jesson L, Davy M, WELLENREUTHER M (2022) The Relative Power of Structural Genomic Variation versus SNPs in Explaining the Quantitative Trait Growth in the Marine Teleost Chrysophrys auratus. Genes 13 (7), 1129-1146  
89  Swaegers J, Sánchez-Guillén RA, Chauhan P, WELLENREUTHER M, Hansson B (2022) Restricted X chromosome introgression and support for Haldane’s rule in hybridizing damselflies. Proceedings of the Royal Society B 289 (1979), 20220968  
88  Bertram A, Fairclough D, Sandoval-Castillo J, Brauer C, Fowler A, WELLENREUTHER M, Beheregaray LB (2022) Fisheries genomics of snapper (Chrysophrys auratus) along the western Australian coast. Evolutionary Applications 15 (7), 1099-1114  
87  Babu KM, Bentall D, Ashton DT, Puklowski M, Fantham W, Lin HT, Tuckey NPL, WELLENREUTHER M, Jesson LK (2022) Computer vision in aquaculture: A case study of juvenile fish counting. Journal of the Royal Society of New Zealand 53 (1), 1-17  
86  Tuckey NPL, Ashton DT, Li J, Lin HT, Walker SP, Symonds JE, WELLENREUTHER M (2022) Automated image analysis as a tool to measure individualised growth and population structure in Chinook salmon (Oncorhynchus tshawytscha). Aquaculture, Fish and Fisheries 2 (5), 1-12  
85  Anastasiadi D, Piferrer F, WELLENREUTHER M, Burraco AB (2022) Fish as model systems to study epigenetic drivers in human self-domestication and neurodevelopmental cognitive disorders. Genes 13 (6), 987 
84  WELLENREUTHER M (2022) Supergenes promote ecological stasis in a keystone species. Trends in Genetics 38 (7), 629-631  
83  Papa Y, Morrison MA, WELLENREUTHER M, Ritchie PA (2022) Genomic stock structure of the marine teleost tarakihi (Nemadactylus macropterus) provides evidence of fine-scale adaptation and a temperature-associated cline amid panmixia. Frontiers in Ecology and Evolution 10, 862930  
82  Valenza-Troubat N, Montanari S, Ritchie P, WELLENREUTHER M (2022) Unravelling the complex genetic basis of growth in New Zealand silver trevally (Pseudocaranx georgianus). G3: Genes|Genomes|Genetics 12 (3).  
81  Sandoval-Castillo J, Beheregaray LB, WELLENREUTHER M (2022) Genomic prediction of growth in a commercially, recreationally, and culturally important marine resource, the Australian snapper (Chrysophrys auratus). G3: Genes|Genomes|Genetics 12 (3).  
80  Valenza-Troubat N, Davy M, Storey R, Wylie MJ, Hilario E, Ritchie P, WELLENREUTHER M (2022) Differential expression analyses reveal extensive transcriptional plasticity induced by temperature in New Zealand silver trevally (Pseudocaranx georgianus). Evolutionary Applications 15, 237-248  

2021 (12)

79  Yang Y, Xue B, Jesson L, Wylie M, Zhang M, WELLENREUTHER M (2021) Deep Convolutional Neural Networks for Fish Weight Prediction from Images. 2021 36th International Conference on Image and Vision Computing New Zealand (IVCNZ), 1-6  
78  Currie F, Mei Y, Zhang M, WELLENREUTHER M, Jesson L (2021) An Investigation on Multi-Objective Fish Breeding Program Design. 2021 IEEE Symposium Series on Computational Intelligence (SSCI), 1-8  
77  Basjou J-P and WELLENREUTHER M (2021) Genomic signatures of domestication selection in the Australasian snapper (Chrysophrys auratus). Genes 12, 1737  
76  Koot E, Wu C, Ruza I, Hilario E, Storey R, Wells R, Chagné D, WELLENREUTHER M (2021) Genome-wide analysis reveals the genetic stock structure of hoki (Macruronus novaezelandiae). Evolutionary Applications 14 (12), 2848-2863  
75  Catanach A, Ruigrok M, Bowatte D, Davy M, Storey R, Valenza-Troubat N, López-Girona E, Hilario E, Wylie MJ, Chagné D, WELLENREUTHER M (2021) The genome of New Zealand trevally (Carangidae: Pseudocaranx georgianus) uncovers a XY sex determination locus. BMC Genomics 22, 785  
74  Anastasiadi D, Venney CJ, Bernatchez L, WELLENREUTHER M (2021) Epigenetic inheritance and reproductive mode in plants and animals. Trends in Ecology & Evolution 36 (12), 1124-1140  
73  Berdan EL, Mérot C, Pavia H, WELLENREUTHER M, Butlin RK, Johannesson K (2021) A large chromosomal inversion shapes gene expression in seaweed flies (Coelopa frigida). Evolution Letters 5 (6), 607-624  
72  Mérot C, Berdan E, Cayuela H, Djambazian H, Ferchaud AL, Laporte M, Normandeau E, Ragoussis J, WELLENREUTHER M, Bernatchez L (2021) Locally-adaptive inversions structure genetic variation at different geographic scales in a seaweed fly. Molecular Biology and Evolution 38 (9), 3953–3971  
71  Chauhan P, Swaegers J, Sánchez-Guillén RA, Svensson EI, WELLENREUTHER M, Hansson B (2021) Genome assembly, sex-biased gene expression and dosage compensation in the damselfly Ischnura elegans. Genomics 113 (4), 1828-1837  
70  Irving K, WELLENREUTHER M, Ritchie P (2021) Description of the growth hormone gene of the marine teleost Chrysophrys auratus and associated intra- and interspecific variation. Accepted in Journal of Fish Biology. 
69  Valenza-Troubat N, Hilario E, Monanari S, Morrison-Whittle P, Ashton D, Ritchie P, WELLENREUTHER M (2021) Evaluating new species for aquaculture: A genomic dissection of growth in the New Zealand silver trevally (Pseudocaranx georgianus). Accepted in Evolutionary Applications. 
68  Papa Y, Halliwell AG, Morrison MA, WELLENREUTHER M, Ritchie PA (2021) Phylogeographic structure and historical demography of tarakihi (Nemadactylus macropterus) and king tarakihi (Nemadactylus n.sp.) in New Zealand. New Zealand Journal of Marine and Freshwater Research.  

2020 (6)

67  Sánchez-Guillén RA, Fadia-Ceccarelli S, Villalobos F, Neupane S, Rivas-Torres A, Sanmartín-Villar I, WELLENREUTHER M, Bybee SM, Velásquez-Vélez MJ, Realpe E, Chávez-Ríos JR, Dumont HJ, Cordero-Rivera A (2020) The evolutionary history of colour polymorphism in Ischnura damselflies (Odonata: Coenagrionidae). Odonatologica, 49 (3/4)  
66  Papa Y, Oosting T, Valenza-Troubat N, WELLENREUTHER M, Ritchie PA (2020) Genetic stock structure of New Zealand fish and the use of genomics in fisheries management: an overview and outlook. New Zealand Journal of Zoology, 1-31  
65  Oosting T, Hilario E, WELLENREUTHER M, Ritchie PA (2020) DNA degradation in fish: practical solutions and guidelines to improve DNA preservation for genomic research. Ecology and Evolution 10 (16), 8643–8651  
64  Ferchaud AL, Laporte M, WELLENREUTHER M (2020) From the woods to the halls of science: Louis Bernatchez’s contributions to science, wildlife conservation and people. Evolutionary Applications 13 (6), 1105-1116  
63  Mérot C, Oomen RA, Tigano A, WELLENREUTHER M (2020) A roadmap for understanding the evolutionary significance of structural genomic variation. Trends in Ecology and Evolution 35 (7), 561-572  
62  Mérot C, Llaurens V, Normandeau E, Bernatchez L, WELLENREUTHER M (2020) Balancing selection via life-history trade-offs maintains an inversion polymorphism in a seaweed fly. Nature Communications 11 (1), 1-11  

2019 (9)

61  Berdan E, Enge S, Nylund GM, WELLENREUTHER M, Martens GA, Pavia H (2019) Genetic divergence and phenotypic plasticity contribute to variation in cuticular hydrocarbons in the seaweed fly Coelopa frigida. Ecology and Evolution 9 (21), 12156-12170  
60  Oosting T, Star B, Barrett JH, WELLENREUTHER M, Ritchie PA, Rawlence NJ (2019) Unlocking the potential of ancient fish DNA in the genomic era. Evolutionary Applications 12 (8), 1513-1522  
59  Nava‐Bolaños A, Sánchez‐Guillén RA, WELLENREUTHER M, Muñoz J, Torres‐Pachón M, Novelo‐Gutiérrez R, Córdoba‐Aguilar A (2019) Predicting hybridisation as a consequence of climate change in damselflies. Insect Conservation and Diversity 12 (5), 427-436  
58  Dowd GC, Chong G, Lee LEJ, Marshall SN, WELLENREUTHER M (2019) Fish in vitro biology: another piece of the puzzle for the aquaculture of New Zealand native species Chrysophrys auratus. In vitro cellular & Developmental Biology-Animal 55, S27-S28  
57  Ashton DT, Hilario E, Jaksons P, Ritchie PA, WELLENREUTHER M (2019) Genetic diversity and heritability of economically important traits in captive Australasian snapper (Chrysophrys auratus). Aquaculture 505, 190-198  
56  Ashton DT, Ritchie PA, WELLENREUTHER M (2019) High-density linkage map and QTLs for growth in snapper (Chrysophrys auratus). G3: Genes, Genomes, Genetics 9 (4), 1027-1035  
55  WELLENREUTHER M, Mérot C, Berdan E, Bernatchez L (2019) Going beyond SNPs: the role of structural genomic variants in adaptive evolution and species diversification. Molecular Ecology 28 (6), 1203-1209  
54  WELLENREUTHER M, Le Luyer J, Cook D, Ritchie PA, Bernatchez L (2019) Domestication and temperature modulate gene expression signatures and growth in the Australasian snapper Chrysophrys auratus. G3 Genes, Genomes, Genetics 9 (1), 105-116  
53  Catanach A, Crowhurst R, Deng C, David C, Bernatchez L, WELLENREUTHER M (2019) The genomic pool of standing structural variation outnumbers single nucleotide polymorphism by threefold in the marine teleost Chrysophrys auratus. Molecular Ecology 28 (6), 1210-1223  

2018 (5)

52  Berdan E, Rosenquist H, Larson K, WELLENREUTHER M (2018) Inversion frequencies and phenotypic effects are modulated by the environment: insights from a reciprocal transplant study in Coelopa frigida. Ecology and Evolution 32 (6), 683-698  
51  Merot C, Berdan E, Babin C, Normandeau E, WELLENREUTHER M, Bernatchez L (2018) Intercontinental karyotype–environment parallelism supports a role for a chromosomal inversion in local adaptation in a seaweed fly. Proceedings of the Royal Society B 285 (1881), 20180519  
50  WELLENREUTHER M and Bernatchez L (2018) Eco-evolutionary genomics of chromosomal inversions. Trends in Ecology and Evolution 33 (6), 427-440  
49  WELLENREUTHER M, Muñoz J, Chávez-Ríos JM, Hansson B, Cordero-Rivera A, Sánchez-Guillén RA (2018) Molecular and ecological signatures of an expanding hybrid zone. Ecology and Evolution 8 (10), 4793-4806  
48  Griffin C, Day N, Rosenquist H, WELLENREUTHER M, Bunnefeld N, Gilburn AS (2018) Tidal range and recovery from the impacts mechanical beach grooming. Ocean and Coastal Management 154, 66-71  

2017 (6)

47  Bernatchez L and WELLENREUTHER M (2017) Synergistic integration of genomics and ecoevolutionary dynamics for sustainable fisheries: A reply to Kuparinen and Uusi-Heikkilä. Trends in Ecology and Evolution 33 (5), 308-310  
46  WELLENREUTHER M (2017) Balancing selection maintains cryptic colour morphs. Molecular Ecology 26 (22), 6185-6188  
45  Bernatchez L, WELLENREUTHER M*, Araneda C, Ashton D, Barth JM, Beacham TD, Maes GE, Martinsohn JT, Miller KM, Naish KA, Ovenden JR, Primmer CR, Ho Young S, Therkildsen NO, Withler RE (2017) Harnessing the power of genomics to secure the future of seafood. Trends in Ecology and Evolution 32 (9), 665-680 (*shared first authorship) (In the top 5% of all research outputs by Altmetric (score = 80, 21 Oct 2017))  
44  Sánchez-Guillén RA, WELLENREUTHER M, Chávez-Ríos JR, Beatty CD, Rivas-Torres A, Velasquez-Velez MI, Cordero-Rivera A (2017) Alternative reproductive strategies and the maintenance of female color polymorphism in damselflies. Ecology and Evolution 7 (15), 5592-5602  
43  WELLENREUTHER M, Rosenquist H, Jaksons P, Larson KW (2017) Local adaptation along an environmental cline in a species with an inversion polymorphism. Journal of Evolutionary Biology 30, 1068-1077  
42  Ashton D, Ritchie PA, WELLENREUTHER M (2016) Fifteen years of QTL studies in fish: challenges and future directions. Molecular Ecology 26 (6), 1465–1476 (Invited Contribution)  

2016 (7)

41  Chauhan P, WELLENREUTHER M, Hansson B (2016) Transcriptome profiling in the damselfly Ischnura elegans identifies genes with sex-biased expression. BMC Genomics 17 (1), 33–46  
40  Bybee S, Córdoba-Aguilar A, Duryea C, Futahashi R, Hansson B, Lorenzo-Carballa O, Schilder R, Stoks R, Suvorov A, Svensson E, Swaegers J, Takahashi Y, Watts P, WELLENREUTHER M (2016) Odonates as a bridge between ecology and evolutionary genomics. Frontiers in Zoology 13 (1), 1-20  
39  WELLENREUTHER M and Otto S (2016) Women in evolution – highlighting the changing face of evolutionary biology. Evolutionary Applications 9 (1), 3–16  
38  WELLENREUTHER M and Sánchez-Guillén RA (2016) Non-adaptive radiation in damselflies. Evolutionary Applications 9 (1), 103–118 (Invited Contribution)  
37  WELLENREUTHER M and Hansson B (2016) Detecting polygenic evolution: problems, pitfalls, and promises. Trends in Genetics 32 (3), 155–164  
36  Kirkeby C, WELLENREUTHER M, Brydegaard M (2016) Observations of movement dynamics of flying insects using high resolution lidar. Scientific Reports 6, 29083  
35  Lancaster LT, Dudaniec RY, Chauhan P, WELLENREUTHER M, Svensson EI, Hansson B (2016) Gene expression under thermal stress varies across a geographic range expansion front. Molecular Ecology 25 (5), 1141-1156  

2015 (1)

34  Sánchez‐Guillén RA, Córdoba‐Aguilar A, Hansson B, Ott J, WELLENREUTHER M (2016) Evolutionary consequences of climate‐induced range shifts in insects. Biological Reviews 91 (4), 1050-1064  

2014 (6)

33  WELLENREUTHER M, Svensson E, Hansson B (2014) Sexual selection and genetic colour polymorphisms in animals. Molecular Ecology 23 (22), 5398-5414  
32  Chauhan P, Hansson B, Kraaijeveld K, de Knijff P, Svensson E, WELLENREUTHER M (2014) De novo transcriptome of Ischnura elegans provides insights into sensory biology, colour and vision genes. BMC Genomics 15 (1), 808  
31  Svensson E, Runemark A, Verzijden M, WELLENREUTHER M (2014) Sex differences in developmental plasticity and canalization shape population divergence in mate preferences. Proceedings of the Royal Society B: Biological Sciences 281 (1797), 20141636  
30  Sánchez-Guillén RA, Córdoba-Aguilar A, Cordero-Rivera A, WELLENREUTHER M (2014) Rapid evolution of prezygotic barriers in non-territorial damselflies. Biological Journal of the Linnean Society 113 (2), 485-496  
29  WELLENREUTHER M (2014) What can reproductive barriers tell us about speciation? Proceedings of Peerage of Science 1, e3  
28  Sánchez-Guillén RA, Córdoba-Aguilar A, Cordero-Rivera A, WELLENREUTHER M (2013) Genetic divergence predicts reproductive isolation in damselflies. Journal of Evolutionary Biology 27 (1), 76-87  

2013 (2)

27  Sánchez-Guillén RA, Hammers M, Van Gossum H, Hansson B, Cordero-Rivera A, WELLENREUTHER M (2013) Ontogenetic shifts in male mating preference and morph-specific polyandry in a female colour polymorphic insect. BMC Evolutionary Biology 13 (1), 116  
26  WELLENREUTHER M, Sánchez-Guillén RA, Cordero-Rivera A, Svensson EI, Hansson B (2013) Male-biased recombination in odonates: insights from a linkage map of the damselfly Ischnura elegans. Journal of Genetics 92 (1), 115-119  

2012 (3)

25  WELLENREUTHER M, Larson KW, Svensson EI (2012) Climatic niche similarity and geographic range limits in ecologically similar coexisting damselflies. Ecology 93(6), 1353-1366  
24  Runemark A, WELLENREUTHER M, Jayaweera HHE, Svanberg S, Brydegaard M (2012) Rare events in remote dark field spectroscopy: an ecological case study of insects. Journal of Selected Topics in Quantum Electronics 18(5), 1573-1582
23  Vercken E, WELLENREUTHER M, Svensson EI, Mauroy B (2012) Don't fall off the adaptation cliff: when asymmetrical fitness selects for suboptimal traits. PLoS ONE 7 (4), e34889  

2011 (5)

22  Sánchez-Guillén RA, WELLENREUTHER M, Cordero-Rivera A (2011) Strong asymmetry in the relative strengths of prezygotic and postzygotic barriers between two damselfly sister species. Evolution: International Journal of Organic Evolution 66 (3), 690-707  
21  Sánchez-Guillén RA, WELLENREUTHER M, Cordero A, Hansson B (2011) Introgression and rapid species turnover in sympatric damselflies. BMC Evolutionary Biology 11 (1), 210-226  
20  Sánchez-Guillén RA, Hansson B, WELLENREUTHER M, Svensson EI, Cordero-Rivera A (2011) The influence of stochastic and selective forces in the population divergence of female colour polymorphism in damselflies of the genus Ischnura. Heredity 107 (6), 513-522  
19  WELLENREUTHER M, Sánchez-Guillén RA, Cordero-Rivera A, Svensson EI, Hansson B (2011) Environmental and climatic determinants of molecular diversity and genetic population structure in a coenagrionid damselfly. PLoS ONE 6 (6), e20440  
18  Knott KE, Keränen I, Kuitunen K, WELLENREUTHER M (2011) Microsatellite markers for identifying hybrids of the damselflies Calopteryx splendens and C. virgo. Molecular Ecology Resources 11 (4), 757-758  

2010 (6)

17  Guan Z, Brydegaard M, Lundin P, WELLENREUTHER M, Runemark A, Svensson EI, Svanberg S (2010) Insect monitoring with fluorescence LIDAR techniques: field experiments. Applied Optics 49(27), 5133-5142  
16  WELLENREUTHER M, Brock M, Montgomery J, Clements KD (2010) Comparative morphology of the mechanosensory lateral line in a clade of New Zealand triplefin species. Brain, Behavior and Evolution 75(4), 292-308  
15  WELLENREUTHER M, Vercken E, Svensson EI (2010) A role of ecology in male mate discrimination of immigrant females. Biological Journal of the Linnean Society 100 (3), 506-518  
14  Jönsson J, WELLENREUTHER M, Tyler T (2010) Ten polymorphic microsatellite markers for Hieracium s. s. (Asteraceae). Conservation Genetics Resources 2 (1), 295-300  
13  WELLENREUTHER M, Sánchez-Guillén RA, Cordero A, Hansson B (2010) Development of 12 polymorphic microsatellite loci in Ischnura elegans (Odonata: Coenagrionidae). Molecular Ecology Resources 10 (3), 576-579  
12  WELLENREUTHER M, Tynkkynen K, Svensson EI (2010) Simulating range expansion: male species recognition and loss of premating isolation in damselflies. Evolution 64 (1), 242-252  

2009 (4)

11  Brydegaard M, Guan Z, WELLENREUTHER M, Svanberg S (2009) Insect monitoring with fluorescence lidar techniques: feasibility study. Applied Optics 48 (30), 5642-5888  
10  Feary D, WELLENREUTHER M, Clements KD (2009) Trophic ecology of New Zealand’s triplefin fishes (Family: Tripterygiidae). Marine Biology 156 (8), 1703–1714  
09  WELLENREUTHER M, Barrett PT, Clements KD (2009) The evolution of habitat specialisation in a group of marine triplefin fishes. Evolutionary Ecology 23 (4), 557-568  
08  WELLENREUTHER M, Runemark A, Svensson EI, Hansson B (2009) Isolation and characterization of polymorphic microsatellite loci for the Skyros Wall Lizard Podarcis gaigeae (Squamata: Lacertidae). Molecular Ecology Resources 9 (3), 1005-1008  

2008 (4)

07  Hilton Z, WELLENREUTHER M, Clements KD (2008) Physiology underpins habitat partitioning in a sympatric sister-species pair of intertidal fishes. Functional Ecology 22 (6), 1108-1117  
06  WELLENREUTHER M and Clements KD (2008) Determinants of habitat association in a sympatric clade of marine fishes. Marine Biology 154 (2), 393-402  
05  WELLENREUTHER M, Syms C, Clements KD (2008) Body size and ecological diversification in a sister species pair of triplefin fishes. Evolutionary Ecology 22 (4), 575-592  
04  WELLENREUTHER M, Syms C, Clements KD (2008) Consistent habitat use across biogeographic gradients. Ecography 31 (1), 84-94  

2007 and before (3)

03  WELLENREUTHER M and Clements KD (2007) Reproductive isolation in temperate reef fishes. Marine Biology 152 (3), 619-630  
02  WELLENREUTHER M, Barrett PB, Clements KD (2007) Ecological diversification in habitat use in subtidal triplefin fishes (Tripterygiidae). Marine Ecology Progress Series 330, 235-246  
01  WELLENREUTHER M and Connell SD (2002) Response of predators to prey abundance: separating the effects of prey density and patch size. Journal of Experimental Marine Biology and Ecology 273 (1), 61-71  

 

Reports

total #n=1
01  Mace P, Ritchie P, WELLENREUTHER M, McKenzie J, Hupman K, Hillary R, Francis M, Bunce M (2020) Report of the Workshop on the Utility of Genetic Analyses for Addressing New Zealand Fisheries Questions. New Zealand Fisheries Science Review 2020/01. 28 p.  

 

Thesis

total #n=2
02  WELLENREUTHER M (2007) Ecological factors associated with speciation in New Zealand triplefin fishes (Tripterygiidae). PhD Thesis, School of Biological Sciences, University of Auckland, Auckland, New Zealand (Additional information) 
01  WELLENREUTHER M (2000) Effect of prey number and density on predator foraging. MSc Thesis, School of Earth & Environmental Sciences. Adelaide, University of Adelaide, Australia 

 

ORCID Biography


“Nothing in Biology Makes Sense Except in the Light of Evolution” Dobzhansky (1973)